Eos, I agree with you that many players favor recon because of the simplicity of the class, thus clan wars are mostly fought on CTF. However, this will not change, nor do I think it should. Versatile players - such as you and I - really have no choice but to play CTF if we are to clan war. Most players like recon and CTF, so I don't think the few (us) should have our way and have recon modified/removed or CTF limited/removed. I think a reasonable approach is to award a fraction of points for a drawn clan war.
In my many clan wars, I have never witnessed a drawn DM or KotH clan war. I have participated in hundreds (if not thousands) of drawn CTF cws. I think that this should be amended, because all drawn CTF matches always last 10 minutes. I think players should be rewarded for their 10 minutes of play, because both teams played well enough to create a draw. Sometimes teams are simply even and draws are inevitable. It's not like I'm suggesting anything crazy, In sports a draw has a positive value